Hi Peter,
I am curious to know more about your Mdes RE experience so far. I know you mention that you are mostly happy with your experience. Why do you say this? Also What are the pros and cons of the program and also the biggest conception out there is that it is not as good as Columbia ot MIT. In fact Harvard and MIT have a cross listing agreement but for that annual developer, lawyer, and finance simulation, MIT sees it fit to trek 200 miles down the road to Columbia GSAPP and it completely ignores Harvard's RE program. I understand that Harvard has the name but honestly is there any substance behind that degree in terms of electives and offerings? Also Harvard MBA real estate is a joke 2 classes one in real estate as a hobby and the other in private equity.
		
		
	 
I was hoping more to field individual messages but I might as well respond to all:
I say "mostly" because there are pros and cons to every program.  A challenge with choosing real estate programs is that each one is so different that they are difficult to compare.  After talking to alumni, students, and practitioners about Harvard, Columbia, MIT, and USC, I've come to sincerely believe that none of these programs provide an edge for hiring, so you should choose whichever program's substance fits best for you.  MSRED's are about your own networking.  Unless you're at HBS, Wharton, or Columbia Business School, you won't find substantial active recruiting so don't lose sleep over the reputations of three esoteric programs at great universities.
As far as how Columbia relates to Harvard there's a few notable comparisons.  First, since you brought it up, I think you're reading too much into the negotiations exercise.  The professor who teaches the class at MIT, Tod McGrath, earned is BA and MBA from Columbia and therefore established the link between the two institutions.  If they chose partners based on substance, they'd be heading to Cornell, which probably offers the most thorough curriculum.  Beyond cross-registering, Harvard and MIT attend each other's events, have Harvard-MIT mixers, and co-host 2 annual Harvard-MIT real estate career days.  As it relates to reputation, I can't speak to what you've been hearing in your circles but do know that I haven't met anyone at Harvard who was rejected by Columbia, but do know that almost all of us turned down Columbia to come to Harvard.  Recent alumni from our tiny program have landed great jobs and internships.  I'll be in New York next summer at a large development firm and 2 of us 4 interns at the firm will be from Harvard GSD.  I was worried about reputation too because the program is so small but, honestly, I have found being at Harvard to open-up doors for me to a greater extent than I expected.  
The cons of the program is that we aren't our own department within the university so we float within other departments, which makes the program a bit amorphous.  Also, Harvard GSD definitely prioritizes the architecture program, so we aren't valued at the school like the more design oriented disciplines.  The pros are many, but namely the flexibility of the curriculum.  If you are coming to the program with experience or very specific interests it's great because rather than following a proscribed curriculum you can forge your own way.  This can be overwhelming for some, and elbowing your way into classes can be stressful, but overall, Harvard encourages us to take classes across the university, and we almost all take courses at the business school, kennedy school, and MIT, in addition to the GSD.  So far I've enrolled in the following classes:
Advanced Real Estate Finance (Harvard GSD)
Real Estate Economics and Market Analysis (Harvard GSD)
Field Studies in Real Estate, Planning, and Urban Design (basically a real estate development studio) (Harvard GSD)
Real Estate Capital Markets (MIT)
Urban Innovation: Concepts and Practices (Harvard Kennedy School)
Innovative Project Delivery in the Public and Private Sectors (MIT)
Urban Design (Harvard GSD)
Real Estate Development and Finance (Harvard GSD)
Immersive Field Study: New York City; Private Equity and Real Estate (Harvard Business School)
Creating Real Estate Ventures: A Legal Perspective (Harvard GSD)
Building and Leading Real Estate Enterprises and Entreprenuership (Harvard GSD)
Public and Private Development (Harvard GSD)
Some of my classmates take all finance classes, others focus on sustainability--it's up to you and your initiative.  What's also a big pro is the size of the program.  In contrast to Columbia's 100 students a year, Harvard's program is 15-20 students.  It ends-up being tight knit.  We look out for each other, have a very active Real Estate Development club, and get well acquainted with our professors and others at the school.  When we reach out to alumni, we are a novelty since there are so few of us and so alumni tend to be very warm and helpful--we aren't one of hundreds of current students hassling them each year.
Overall, any of you fortunate enough to get into Columbia, Harvard, or MIT, are in great hands--congratulations.  I kept looking for "red flags" during my research last year but, everyone I spoke with had nothing but positive things to say about each program.